Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col25a1Q99MQ5 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col25a1Q99MQ5 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col25a1Q99MQ5 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col25a1Q99MQ5 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col25a1Q99MQ5 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col25a1Q99MQ5 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col25a1Q99MQ5 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col25a1Q99MQ5 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15□□□□□ -0.01
Col25a1Q99MQ5 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Col25a1Q99MQ5 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col25a1Q99MQ5 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col25a1Q99MQ5 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Col25a1Q99MQ5 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15□□□□□ -0.01
Col25a1Q99MQ5 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col25a1Q99MQ5 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col25a1Q99MQ5 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Col25a1Q99MQ5 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Gm4993-201ENSMUST00000118719 1174 ntBASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col25a1Q99MQ5 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Mir7654-201ENSMUST00000185082 70 ntBASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Gm7561-201ENSMUST00000211203 886 ntBASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Gm16476-201ENSMUST00000221544 139 ntBASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col25a1Q99MQ5 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Gm14263-201ENSMUST00000117955 746 ntBASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Gm5354-201ENSMUST00000182417 973 ntBASIC14.97□□□□□ -0.01
Col25a1Q99MQ5 Gm27516-201ENSMUST00000184237 98 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms