Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.02□□□□□ -0.17
Vmp1Q99KU0 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.02□□□□□ -0.17
Vmp1Q99KU0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmp1Q99KU0 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmp1Q99KU0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmp1Q99KU0 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmp1Q99KU0 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmp1Q99KU0 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vmp1Q99KU0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.02□□□□□ -0.17
Vmp1Q99KU0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmp1Q99KU0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmp1Q99KU0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmp1Q99KU0 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmp1Q99KU0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmp1Q99KU0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmp1Q99KU0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmp1Q99KU0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vmp1Q99KU0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Gm12008-201ENSMUST00000117791 755 ntBASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.01□□□□□ -0.17
Vmp1Q99KU0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmp1Q99KU0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Vmp1Q99KU0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vmp1Q99KU0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vmp1Q99KU0 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vmp1Q99KU0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vmp1Q99KU0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vmp1Q99KU0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vmp1Q99KU0 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vmp1Q99KU0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vmp1Q99KU0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vmp1Q99KU0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vmp1Q99KU0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vmp1Q99KU0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vmp1Q99KU0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vmp1Q99KU0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vmp1Q99KU0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vmp1Q99KU0 Gm17271-201ENSMUST00000165535 355 ntBASIC14□□□□□ -0.17
Vmp1Q99KU0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14□□□□□ -0.17
Vmp1Q99KU0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14□□□□□ -0.17
Vmp1Q99KU0 Gm10175-201ENSMUST00000086013 645 ntBASIC14□□□□□ -0.17
Vmp1Q99KU0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14□□□□□ -0.17
Vmp1Q99KU0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vmp1Q99KU0 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vmp1Q99KU0 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vmp1Q99KU0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vmp1Q99KU0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vmp1Q99KU0 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vmp1Q99KU0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
Vmp1Q99KU0 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.99□□□□□ -0.17
Vmp1Q99KU0 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms