Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc1bQ920F6 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc1bQ920F6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc1bQ920F6 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Smc1bQ920F6 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.77■□□□□ 0.27
Smc1bQ920F6 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc1bQ920F6 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1bQ920F6 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Smc1bQ920F6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1bQ920F6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.76■□□□□ 0.27
Smc1bQ920F6 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1bQ920F6 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1bQ920F6 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1bQ920F6 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1bQ920F6 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.76■□□□□ 0.27
Smc1bQ920F6 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1bQ920F6 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1bQ920F6 Gm15487-201ENSMUST00000122373 465 ntBASIC16.76■□□□□ 0.27
Smc1bQ920F6 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1bQ920F6 Gm18049-201ENSMUST00000208909 581 ntBASIC16.76■□□□□ 0.27
Smc1bQ920F6 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.76■□□□□ 0.27
Smc1bQ920F6 Gm9063-201ENSMUST00000223299 582 ntBASIC16.76■□□□□ 0.27
Smc1bQ920F6 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.76■□□□□ 0.27
Smc1bQ920F6 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1bQ920F6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1bQ920F6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Smc1bQ920F6 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1bQ920F6 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1bQ920F6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1bQ920F6 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1bQ920F6 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1bQ920F6 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1bQ920F6 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1bQ920F6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc1bQ920F6 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Smc1bQ920F6 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.76■□□□□ 0.27
Smc1bQ920F6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.76■□□□□ 0.27
Smc1bQ920F6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Gm28630-201ENSMUST00000187806 498 ntBASIC16.75■□□□□ 0.27
Smc1bQ920F6 Gm28631-201ENSMUST00000190740 334 ntBASIC16.75■□□□□ 0.27
Smc1bQ920F6 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.75■□□□□ 0.27
Smc1bQ920F6 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.75■□□□□ 0.27
Smc1bQ920F6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smc1bQ920F6 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.74■□□□□ 0.27
Smc1bQ920F6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1bQ920F6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1bQ920F6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1bQ920F6 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.74■□□□□ 0.27
Smc1bQ920F6 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1bQ920F6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1bQ920F6 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1bQ920F6 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1bQ920F6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.74■□□□□ 0.27
Smc1bQ920F6 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1bQ920F6 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1bQ920F6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1bQ920F6 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1bQ920F6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1bQ920F6 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Smc1bQ920F6 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.74■□□□□ 0.27
Smc1bQ920F6 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1bQ920F6 Gm27838-201ENSMUST00000184829 128 ntBASIC16.74■□□□□ 0.27
Smc1bQ920F6 Gm29541-201ENSMUST00000191351 678 ntBASIC16.74■□□□□ 0.27
Smc1bQ920F6 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.74■□□□□ 0.27
Smc1bQ920F6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1bQ920F6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1bQ920F6 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1bQ920F6 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
Smc1bQ920F6 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1bQ920F6 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1bQ920F6 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1bQ920F6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1bQ920F6 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1bQ920F6 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smc1bQ920F6 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms