Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Gm13365-201ENSMUST00000121188 973 ntBASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Gm13464-201ENSMUST00000119418 935 ntBASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Mir6990-201ENSMUST00000183724 91 ntBASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Gm8396-201ENSMUST00000057361 823 ntBASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha3Q91Y16 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdha3Q91Y16 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms