Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Gm12849-201ENSMUST00000120013 739 ntBASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Gm8825-201ENSMUST00000182565 998 ntBASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Gm4518-201ENSMUST00000182638 718 ntBASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Gm2651-201ENSMUST00000203560 838 ntBASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Gm7506-201ENSMUST00000207758 815 ntBASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 AC102523.2-201ENSMUST00000227813 983 ntBASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb3Q91XZ7 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 Gm4459-201ENSMUST00000118750 468 ntBASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 AW822252-206ENSMUST00000208904 237 ntBASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb3Q91XZ7 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms