Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx41Q91VN6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx41Q91VN6 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx41Q91VN6 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx41Q91VN6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.67■□□□□ 0.26
Ddx41Q91VN6 Gm18737-201ENSMUST00000173594 937 ntBASIC16.67■□□□□ 0.26
Ddx41Q91VN6 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx41Q91VN6 Mir7023-201ENSMUST00000185093 64 ntBASIC16.67■□□□□ 0.26
Ddx41Q91VN6 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.67■□□□□ 0.26
Ddx41Q91VN6 Gm5779-201ENSMUST00000218467 910 ntBASIC16.67■□□□□ 0.26
Ddx41Q91VN6 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx41Q91VN6 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx41Q91VN6 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx41Q91VN6 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ddx41Q91VN6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx41Q91VN6 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.67■□□□□ 0.26
Ddx41Q91VN6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx41Q91VN6 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx41Q91VN6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Ddx41Q91VN6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ddx41Q91VN6 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.67■□□□□ 0.26
Ddx41Q91VN6 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx41Q91VN6 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx41Q91VN6 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx41Q91VN6 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Ddx41Q91VN6 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx41Q91VN6 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.66■□□□□ 0.26
Ddx41Q91VN6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx41Q91VN6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx41Q91VN6 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ddx41Q91VN6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx41Q91VN6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx41Q91VN6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx41Q91VN6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ddx41Q91VN6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx41Q91VN6 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx41Q91VN6 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx41Q91VN6 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx41Q91VN6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx41Q91VN6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx41Q91VN6 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.66■□□□□ 0.26
Ddx41Q91VN6 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx41Q91VN6 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx41Q91VN6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx41Q91VN6 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx41Q91VN6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx41Q91VN6 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx41Q91VN6 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.66■□□□□ 0.26
Ddx41Q91VN6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ddx41Q91VN6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ddx41Q91VN6 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ddx41Q91VN6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms