Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.42■□□□□ 0.06
TraipQ8VIG6 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TraipQ8VIG6 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TraipQ8VIG6 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.42■□□□□ 0.06
TraipQ8VIG6 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TraipQ8VIG6 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TraipQ8VIG6 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TraipQ8VIG6 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.42■□□□□ 0.06
TraipQ8VIG6 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TraipQ8VIG6 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TraipQ8VIG6 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.42■□□□□ 0.06
TraipQ8VIG6 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.42■□□□□ 0.06
TraipQ8VIG6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TraipQ8VIG6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TraipQ8VIG6 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TraipQ8VIG6 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
TraipQ8VIG6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TraipQ8VIG6 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TraipQ8VIG6 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TraipQ8VIG6 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TraipQ8VIG6 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Gm44608-201ENSMUST00000206827 855 ntBASIC15.41■□□□□ 0.06
TraipQ8VIG6 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.41■□□□□ 0.06
TraipQ8VIG6 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TraipQ8VIG6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TraipQ8VIG6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TraipQ8VIG6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.4■□□□□ 0.06
TraipQ8VIG6 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TraipQ8VIG6 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Gm21854-201ENSMUST00000179901 471 ntBASIC15.4■□□□□ 0.06
TraipQ8VIG6 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.4■□□□□ 0.06
TraipQ8VIG6 Gm28631-201ENSMUST00000190740 334 ntBASIC15.4■□□□□ 0.06
TraipQ8VIG6 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Gm6916-202ENSMUST00000205523 195 ntBASIC15.4■□□□□ 0.06
TraipQ8VIG6 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.4■□□□□ 0.06
TraipQ8VIG6 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.4■□□□□ 0.06
TraipQ8VIG6 Gm20445-201ENSMUST00000061905 565 ntBASIC15.4■□□□□ 0.06
TraipQ8VIG6 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TraipQ8VIG6 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TraipQ8VIG6 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TraipQ8VIG6 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
TraipQ8VIG6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TraipQ8VIG6 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.39■□□□□ 0.05
TraipQ8VIG6 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms