Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Gm8410-201ENSMUST00000117225 605 ntBASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Gm13015-201ENSMUST00000118674 204 ntBASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Gm18049-201ENSMUST00000208909 581 ntBASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ndc1Q8VCB1 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ndc1Q8VCB1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ndc1Q8VCB1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ndc1Q8VCB1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ndc1Q8VCB1 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Ndc1Q8VCB1 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Gm27618-201ENSMUST00000183671 60 ntBASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ndc1Q8VCB1 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms