Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smc5Q8CG46 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.94■□□□□ 0.46
Smc5Q8CG46 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Smc5Q8CG46 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Mir5126-201ENSMUST00000175513 77 ntBASIC17.94■□□□□ 0.46
Smc5Q8CG46 Gm45747-201ENSMUST00000212203 999 ntBASIC17.94■□□□□ 0.46
Smc5Q8CG46 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.94■□□□□ 0.46
Smc5Q8CG46 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Gm5639-201ENSMUST00000122305 2403 ntBASIC17.94■□□□□ 0.46
Smc5Q8CG46 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Smc5Q8CG46 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc5Q8CG46 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.93■□□□□ 0.46
Smc5Q8CG46 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Gm13884-201ENSMUST00000118103 829 ntBASIC17.93■□□□□ 0.46
Smc5Q8CG46 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Gm5177-201ENSMUST00000183092 997 ntBASIC17.93■□□□□ 0.46
Smc5Q8CG46 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc5Q8CG46 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc5Q8CG46 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC17.92■□□□□ 0.46
Smc5Q8CG46 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc5Q8CG46 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc5Q8CG46 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
Smc5Q8CG46 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc5Q8CG46 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc5Q8CG46 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smc5Q8CG46 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smc5Q8CG46 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc5Q8CG46 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc5Q8CG46 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.92■□□□□ 0.46
Smc5Q8CG46 Gm5479-201ENSMUST00000160578 435 ntBASIC17.92■□□□□ 0.46
Smc5Q8CG46 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.92■□□□□ 0.46
Smc5Q8CG46 Gm8584-201ENSMUST00000171982 758 ntBASIC17.92■□□□□ 0.46
Smc5Q8CG46 Mir8098-201ENSMUST00000184011 137 ntBASIC17.92■□□□□ 0.46
Smc5Q8CG46 Gm5864-201ENSMUST00000202263 970 ntBASIC17.92■□□□□ 0.46
Smc5Q8CG46 Gm45098-201ENSMUST00000207179 657 ntBASIC17.92■□□□□ 0.46
Smc5Q8CG46 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc5Q8CG46 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Smc5Q8CG46 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc5Q8CG46 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Smc5Q8CG46 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Smc5Q8CG46 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Smc5Q8CG46 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc5Q8CG46 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc5Q8CG46 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Smc5Q8CG46 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc5Q8CG46 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc5Q8CG46 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms