Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pabpc5Q8C7D3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pabpc5Q8C7D3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pabpc5Q8C7D3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pabpc5Q8C7D3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pabpc5Q8C7D3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pabpc5Q8C7D3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.6□□□□□ -0.07
Pabpc5Q8C7D3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pabpc5Q8C7D3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pabpc5Q8C7D3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pabpc5Q8C7D3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pabpc5Q8C7D3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pabpc5Q8C7D3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Gm18737-201ENSMUST00000173594 937 ntBASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Gm18889-201ENSMUST00000174284 929 ntBASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Gm27430-201ENSMUST00000184585 107 ntBASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Gm44333-201ENSMUST00000197168 107 ntBASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pabpc5Q8C7D3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pabpc5Q8C7D3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pabpc5Q8C7D3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pabpc5Q8C7D3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pabpc5Q8C7D3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pabpc5Q8C7D3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.57□□□□□ -0.08
Pabpc5Q8C7D3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pabpc5Q8C7D3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.57□□□□□ -0.08
Pabpc5Q8C7D3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pabpc5Q8C7D3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Pabpc5Q8C7D3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pabpc5Q8C7D3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pabpc5Q8C7D3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pabpc5Q8C7D3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pabpc5Q8C7D3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pabpc5Q8C7D3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pabpc5Q8C7D3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pabpc5Q8C7D3 Mir449b-201ENSMUST00000104833 80 ntBASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms