Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.8□□□□□ -0.36
SprnQ8BWU1 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Gm25990-201ENSMUST00000102440 86 ntBASIC12.8□□□□□ -0.36
SprnQ8BWU1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.8□□□□□ -0.36
SprnQ8BWU1 Gm15173-201ENSMUST00000122049 433 ntBASIC12.8□□□□□ -0.36
SprnQ8BWU1 Gm4535-201ENSMUST00000182274 558 ntBASIC12.8□□□□□ -0.36
SprnQ8BWU1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.8□□□□□ -0.36
SprnQ8BWU1 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Olfr286-202ENSMUST00000205305 969 ntBASIC12.8□□□□□ -0.36
SprnQ8BWU1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Gm10355-201ENSMUST00000097146 517 ntBASIC12.8□□□□□ -0.36
SprnQ8BWU1 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SprnQ8BWU1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.79□□□□□ -0.36
SprnQ8BWU1 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SprnQ8BWU1 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.79□□□□□ -0.36
SprnQ8BWU1 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.79□□□□□ -0.36
SprnQ8BWU1 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.79□□□□□ -0.36
SprnQ8BWU1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.79□□□□□ -0.36
SprnQ8BWU1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SprnQ8BWU1 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SprnQ8BWU1 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SprnQ8BWU1 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SprnQ8BWU1 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SprnQ8BWU1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SprnQ8BWU1 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SprnQ8BWU1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SprnQ8BWU1 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SprnQ8BWU1 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SprnQ8BWU1 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SprnQ8BWU1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SprnQ8BWU1 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
SprnQ8BWU1 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms