Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne3Q8BT60 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Cpne3Q8BT60 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne3Q8BT60 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cpne3Q8BT60 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne3Q8BT60 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne3Q8BT60 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne3Q8BT60 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne3Q8BT60 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Cpne3Q8BT60 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne3Q8BT60 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne3Q8BT60 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne3Q8BT60 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne3Q8BT60 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne3Q8BT60 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne3Q8BT60 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne3Q8BT60 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne3Q8BT60 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Cpne3Q8BT60 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.02□□□□□ -0.17
Cpne3Q8BT60 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.02□□□□□ -0.17
Cpne3Q8BT60 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms