Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trpa1Q8BLA8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trpa1Q8BLA8 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trpa1Q8BLA8 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trpa1Q8BLA8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trpa1Q8BLA8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trpa1Q8BLA8 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.3■□□□□ 0.04
Trpa1Q8BLA8 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Trpa1Q8BLA8 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trpa1Q8BLA8 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trpa1Q8BLA8 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.3■□□□□ 0.04
Trpa1Q8BLA8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trpa1Q8BLA8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Gm15483-201ENSMUST00000120338 456 ntBASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.29■□□□□ 0.04
Trpa1Q8BLA8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Trpa1Q8BLA8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trpa1Q8BLA8 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trpa1Q8BLA8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trpa1Q8BLA8 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Trpa1Q8BLA8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trpa1Q8BLA8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trpa1Q8BLA8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trpa1Q8BLA8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.27■□□□□ 0.04
Trpa1Q8BLA8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.27■□□□□ 0.04
Trpa1Q8BLA8 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trpa1Q8BLA8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trpa1Q8BLA8 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trpa1Q8BLA8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trpa1Q8BLA8 Mir1895-201ENSMUST00000122615 79 ntBASIC15.27■□□□□ 0.04
Trpa1Q8BLA8 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trpa1Q8BLA8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trpa1Q8BLA8 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trpa1Q8BLA8 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.27■□□□□ 0.04
Trpa1Q8BLA8 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.27■□□□□ 0.04
Trpa1Q8BLA8 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms