Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rif1Q6PR54 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Rif1Q6PR54 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rif1Q6PR54 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rif1Q6PR54 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rif1Q6PR54 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rif1Q6PR54 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rif1Q6PR54 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rif1Q6PR54 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rif1Q6PR54 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rif1Q6PR54 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rif1Q6PR54 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rif1Q6PR54 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Gm4804-201ENSMUST00000182234 999 ntBASIC12.2□□□□□ -0.46
Rif1Q6PR54 Gm45453-201ENSMUST00000211758 853 ntBASIC12.2□□□□□ -0.46
Rif1Q6PR54 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.2□□□□□ -0.46
Rif1Q6PR54 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rif1Q6PR54 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.2□□□□□ -0.46
Rif1Q6PR54 Gm12208-201ENSMUST00000122004 163 ntBASIC12.2□□□□□ -0.46
Rif1Q6PR54 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.2□□□□□ -0.46
Rif1Q6PR54 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.2□□□□□ -0.46
Rif1Q6PR54 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Rif1Q6PR54 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Gm20482-202ENSMUST00000174729 825 ntBASIC12.19□□□□□ -0.46
Rif1Q6PR54 CT025551.1-201ENSMUST00000223996 692 ntBASIC12.19□□□□□ -0.46
Rif1Q6PR54 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.19□□□□□ -0.46
Rif1Q6PR54 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Gm17376-201ENSMUST00000166016 84 ntBASIC12.19□□□□□ -0.46
Rif1Q6PR54 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.19□□□□□ -0.46
Rif1Q6PR54 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rif1Q6PR54 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Gm18935-201ENSMUST00000212692 664 ntBASIC12.18□□□□□ -0.46
Rif1Q6PR54 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms