Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Gm23634-201ENSMUST00000175071 91 ntBASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Rnf220Q6PDX6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Rprl3-201ENSMUST00000157400 290 ntBASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Gm7367-201ENSMUST00000057611 492 ntBASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf220Q6PDX6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rnf220Q6PDX6 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rnf220Q6PDX6 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Rnf220Q6PDX6 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rnf220Q6PDX6 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rnf220Q6PDX6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 AA414768-201ENSMUST00000121924 1257 ntBASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf220Q6PDX6 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf220Q6PDX6 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms