Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VclQ64727 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.28□□□□□ -0.12
VclQ64727 Gm27430-201ENSMUST00000184585 107 ntBASIC14.28□□□□□ -0.12
VclQ64727 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VclQ64727 Gm44333-201ENSMUST00000197168 107 ntBASIC14.28□□□□□ -0.12
VclQ64727 Gm2451-201ENSMUST00000199447 999 ntBASIC14.28□□□□□ -0.12
VclQ64727 Gm10290-201ENSMUST00000200451 999 ntBASIC14.28□□□□□ -0.12
VclQ64727 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VclQ64727 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VclQ64727 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VclQ64727 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VclQ64727 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VclQ64727 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VclQ64727 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VclQ64727 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
VclQ64727 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VclQ64727 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.28□□□□□ -0.12
VclQ64727 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VclQ64727 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VclQ64727 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VclQ64727 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VclQ64727 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VclQ64727 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VclQ64727 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VclQ64727 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VclQ64727 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VclQ64727 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
VclQ64727 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VclQ64727 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VclQ64727 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VclQ64727 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VclQ64727 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VclQ64727 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.27□□□□□ -0.13
VclQ64727 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.27□□□□□ -0.13
VclQ64727 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.27□□□□□ -0.13
VclQ64727 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.27□□□□□ -0.13
VclQ64727 Gm18049-201ENSMUST00000208909 581 ntBASIC14.27□□□□□ -0.13
VclQ64727 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VclQ64727 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VclQ64727 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VclQ64727 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VclQ64727 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
VclQ64727 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
VclQ64727 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VclQ64727 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VclQ64727 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VclQ64727 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
VclQ64727 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VclQ64727 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
VclQ64727 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.27□□□□□ -0.13
VclQ64727 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VclQ64727 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.27□□□□□ -0.13
VclQ64727 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VclQ64727 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VclQ64727 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VclQ64727 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VclQ64727 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VclQ64727 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VclQ64727 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VclQ64727 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.26□□□□□ -0.13
VclQ64727 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
VclQ64727 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.26□□□□□ -0.13
VclQ64727 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VclQ64727 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VclQ64727 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.26□□□□□ -0.13
VclQ64727 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.26□□□□□ -0.13
VclQ64727 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VclQ64727 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VclQ64727 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VclQ64727 Efs-202ENSMUST00000227037 2540 ntBASIC14.26□□□□□ -0.13
VclQ64727 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VclQ64727 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VclQ64727 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VclQ64727 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VclQ64727 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VclQ64727 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VclQ64727 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
VclQ64727 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VclQ64727 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.25□□□□□ -0.13
VclQ64727 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VclQ64727 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VclQ64727 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VclQ64727 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VclQ64727 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VclQ64727 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VclQ64727 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
VclQ64727 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VclQ64727 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VclQ64727 Gm15920-201ENSMUST00000118998 402 ntBASIC14.25□□□□□ -0.13
VclQ64727 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
VclQ64727 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VclQ64727 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.25□□□□□ -0.13
VclQ64727 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.25□□□□□ -0.13
VclQ64727 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.25□□□□□ -0.13
VclQ64727 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.25□□□□□ -0.13
VclQ64727 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.25□□□□□ -0.13
VclQ64727 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VclQ64727 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VclQ64727 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VclQ64727 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms