Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccne1Q61457 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccne1Q61457 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccne1Q61457 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccne1Q61457 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ccne1Q61457 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccne1Q61457 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccne1Q61457 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccne1Q61457 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.79■□□□□ 0.6
Ccne1Q61457 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ccne1Q61457 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ccne1Q61457 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccne1Q61457 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccne1Q61457 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccne1Q61457 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccne1Q61457 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccne1Q61457 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccne1Q61457 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC18.79■□□□□ 0.6
Ccne1Q61457 AC154806.6-201ENSMUST00000228192 202 ntBASIC18.79■□□□□ 0.6
Ccne1Q61457 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccne1Q61457 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ccne1Q61457 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccne1Q61457 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccne1Q61457 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccne1Q61457 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccne1Q61457 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.78■□□□□ 0.6
Ccne1Q61457 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccne1Q61457 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ccne1Q61457 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccne1Q61457 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccne1Q61457 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ccne1Q61457 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ccne1Q61457 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ccne1Q61457 Gm12882-201ENSMUST00000121696 517 ntBASIC18.78■□□□□ 0.6
Ccne1Q61457 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccne1Q61457 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccne1Q61457 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ccne1Q61457 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccne1Q61457 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccne1Q61457 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccne1Q61457 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccne1Q61457 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccne1Q61457 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.78■□□□□ 0.6
Ccne1Q61457 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.78■□□□□ 0.6
Ccne1Q61457 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.78■□□□□ 0.6
Ccne1Q61457 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccne1Q61457 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccne1Q61457 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccne1Q61457 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ccne1Q61457 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccne1Q61457 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ccne1Q61457 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccne1Q61457 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccne1Q61457 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccne1Q61457 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccne1Q61457 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccne1Q61457 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccne1Q61457 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccne1Q61457 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccne1Q61457 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccne1Q61457 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccne1Q61457 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccne1Q61457 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccne1Q61457 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC18.77■□□□□ 0.6
Ccne1Q61457 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccne1Q61457 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccne1Q61457 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ccne1Q61457 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccne1Q61457 AC162801.1-201ENSMUST00000220612 198 ntBASIC18.77■□□□□ 0.6
Ccne1Q61457 Gm19220-201ENSMUST00000222682 803 ntBASIC18.77■□□□□ 0.6
Ccne1Q61457 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccne1Q61457 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccne1Q61457 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccne1Q61457 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccne1Q61457 Gm14452-201ENSMUST00000118680 1632 ntBASIC18.77■□□□□ 0.6
Ccne1Q61457 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccne1Q61457 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccne1Q61457 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccne1Q61457 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ccne1Q61457 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccne1Q61457 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccne1Q61457 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccne1Q61457 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccne1Q61457 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ccne1Q61457 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccne1Q61457 Gm15678-201ENSMUST00000117573 960 ntBASIC18.76■□□□□ 0.59
Ccne1Q61457 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ccne1Q61457 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccne1Q61457 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.76■□□□□ 0.59
Ccne1Q61457 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccne1Q61457 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccne1Q61457 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ccne1Q61457 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccne1Q61457 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccne1Q61457 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccne1Q61457 Carlr-201ENSMUST00000181515 2574 ntBASIC18.76■□□□□ 0.59
Ccne1Q61457 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccne1Q61457 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccne1Q61457 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccne1Q61457 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms