Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sim1Q61045 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Sim1Q61045 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Sim1Q61045 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.4□□□□□ -0.1
Sim1Q61045 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sim1Q61045 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.4□□□□□ -0.1
Sim1Q61045 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.4□□□□□ -0.1
Sim1Q61045 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.4□□□□□ -0.1
Sim1Q61045 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sim1Q61045 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.4□□□□□ -0.1
Sim1Q61045 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.4□□□□□ -0.1
Sim1Q61045 Gm18049-201ENSMUST00000208909 581 ntBASIC14.4□□□□□ -0.1
Sim1Q61045 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.4□□□□□ -0.1
Sim1Q61045 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
Sim1Q61045 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.4□□□□□ -0.1
Sim1Q61045 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Sim1Q61045 Gm25857-201ENSMUST00000082788 129 ntBASIC14.4□□□□□ -0.1
Sim1Q61045 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sim1Q61045 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.4□□□□□ -0.1
Sim1Q61045 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sim1Q61045 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sim1Q61045 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sim1Q61045 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sim1Q61045 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sim1Q61045 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sim1Q61045 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sim1Q61045 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Sim1Q61045 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sim1Q61045 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.4□□□□□ -0.1
Sim1Q61045 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sim1Q61045 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sim1Q61045 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.4□□□□□ -0.1
Sim1Q61045 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sim1Q61045 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sim1Q61045 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sim1Q61045 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sim1Q61045 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Sim1Q61045 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Sim1Q61045 Gm14928-201ENSMUST00000120198 477 ntBASIC14.39□□□□□ -0.11
Sim1Q61045 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.39□□□□□ -0.11
Sim1Q61045 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Sim1Q61045 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.39□□□□□ -0.11
Sim1Q61045 Gm9063-201ENSMUST00000223299 582 ntBASIC14.39□□□□□ -0.11
Sim1Q61045 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sim1Q61045 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.39□□□□□ -0.11
Sim1Q61045 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Sim1Q61045 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.39□□□□□ -0.11
Sim1Q61045 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sim1Q61045 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sim1Q61045 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sim1Q61045 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sim1Q61045 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sim1Q61045 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sim1Q61045 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.38□□□□□ -0.11
Sim1Q61045 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Sim1Q61045 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Sim1Q61045 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.38□□□□□ -0.11
Sim1Q61045 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sim1Q61045 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sim1Q61045 Gm27838-201ENSMUST00000184829 128 ntBASIC14.38□□□□□ -0.11
Sim1Q61045 Gm28631-201ENSMUST00000190740 334 ntBASIC14.38□□□□□ -0.11
Sim1Q61045 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.38□□□□□ -0.11
Sim1Q61045 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sim1Q61045 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.38□□□□□ -0.11
Sim1Q61045 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sim1Q61045 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.38□□□□□ -0.11
Sim1Q61045 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sim1Q61045 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Sim1Q61045 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sim1Q61045 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Sim1Q61045 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms