Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ripk1Q60855 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ripk1Q60855 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ripk1Q60855 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ripk1Q60855 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ripk1Q60855 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ripk1Q60855 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Ripk1Q60855 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ripk1Q60855 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ripk1Q60855 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ripk1Q60855 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
Ripk1Q60855 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ripk1Q60855 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ripk1Q60855 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ripk1Q60855 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ripk1Q60855 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ripk1Q60855 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.69□□□□□ -0.22
Ripk1Q60855 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ripk1Q60855 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ripk1Q60855 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ripk1Q60855 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ripk1Q60855 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ripk1Q60855 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ripk1Q60855 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ripk1Q60855 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ripk1Q60855 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ripk1Q60855 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ripk1Q60855 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
Ripk1Q60855 Gm23547-201ENSMUST00000158210 271 ntBASIC13.69□□□□□ -0.22
Ripk1Q60855 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ripk1Q60855 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.69□□□□□ -0.22
Ripk1Q60855 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.69□□□□□ -0.22
Ripk1Q60855 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ripk1Q60855 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ripk1Q60855 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ripk1Q60855 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ripk1Q60855 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ripk1Q60855 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ripk1Q60855 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ripk1Q60855 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.69□□□□□ -0.22
Ripk1Q60855 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.69□□□□□ -0.22
Ripk1Q60855 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Ripk1Q60855 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ripk1Q60855 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ripk1Q60855 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ripk1Q60855 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ripk1Q60855 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ripk1Q60855 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ripk1Q60855 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ripk1Q60855 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ripk1Q60855 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ripk1Q60855 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.68□□□□□ -0.22
Ripk1Q60855 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.68□□□□□ -0.22
Ripk1Q60855 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ripk1Q60855 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ripk1Q60855 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.68□□□□□ -0.22
Ripk1Q60855 Gm2451-201ENSMUST00000199447 999 ntBASIC13.68□□□□□ -0.22
Ripk1Q60855 Gm10290-201ENSMUST00000200451 999 ntBASIC13.68□□□□□ -0.22
Ripk1Q60855 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.68□□□□□ -0.22
Ripk1Q60855 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.68□□□□□ -0.22
Ripk1Q60855 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.68□□□□□ -0.22
Ripk1Q60855 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ripk1Q60855 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ripk1Q60855 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.68□□□□□ -0.22
Ripk1Q60855 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ripk1Q60855 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ripk1Q60855 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ripk1Q60855 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ripk1Q60855 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ripk1Q60855 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ripk1Q60855 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ripk1Q60855 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ripk1Q60855 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ripk1Q60855 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms