Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.23□□□□□ -0.29
Spg11Q3UHA3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Gm45186-201ENSMUST00000206874 478 ntBASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Gm26464-201ENSMUST00000157094 305 ntBASIC13.22□□□□□ -0.29
Spg11Q3UHA3 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Gm43058-201ENSMUST00000197645 625 ntBASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Gm27438-201ENSMUST00000183480 110 ntBASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Gm44126-201ENSMUST00000204831 514 ntBASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Spg11Q3UHA3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Gm12208-201ENSMUST00000122004 163 ntBASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Gm4271-201ENSMUST00000174444 973 ntBASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Spg11Q3UHA3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Spg11Q3UHA3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Spg11Q3UHA3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Spg11Q3UHA3 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.21□□□□□ -0.3
Spg11Q3UHA3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.21□□□□□ -0.3
Spg11Q3UHA3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Spg11Q3UHA3 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms