Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Q3U1D9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.61□□□□□ -0.39
Q3U1D9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Q3U1D9 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3U1D9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3U1D9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3U1D9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3U1D9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3U1D9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Q3U1D9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3U1D9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3U1D9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Q3U1D9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.6□□□□□ -0.39
Q3U1D9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Q3U1D9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.6□□□□□ -0.39
Q3U1D9 Gm5866-201ENSMUST00000177881 973 ntBASIC12.6□□□□□ -0.39
Q3U1D9 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Q3U1D9 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.6□□□□□ -0.39
Q3U1D9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3U1D9 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3U1D9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3U1D9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Q3U1D9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3U1D9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Q3U1D9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3U1D9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3U1D9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Q3U1D9 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3U1D9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.6□□□□□ -0.39
Q3U1D9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Q3U1D9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3U1D9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3U1D9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3U1D9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Q3U1D9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.59□□□□□ -0.39
Q3U1D9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Q3U1D9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Gm45453-201ENSMUST00000211758 853 ntBASIC12.59□□□□□ -0.39
Q3U1D9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Q3U1D9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Q3U1D9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Q3U1D9 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.59□□□□□ -0.39
Q3U1D9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Q3U1D9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Q3U1D9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Q3U1D9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Q3U1D9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Q3U1D9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Q3U1D9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Q3U1D9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Q3U1D9 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.58□□□□□ -0.4
Q3U1D9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Q3U1D9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Q3U1D9 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Q3U1D9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Q3U1D9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Q3U1D9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Q3U1D9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Q3U1D9 Mir1897-201ENSMUST00000122581 272 ntBASIC12.58□□□□□ -0.4
Q3U1D9 Gm27631-201ENSMUST00000184163 466 ntBASIC12.58□□□□□ -0.4
Q3U1D9 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Q3U1D9 Gm16476-201ENSMUST00000221544 139 ntBASIC12.58□□□□□ -0.4
Q3U1D9 Dupd1-202ENSMUST00000224735 548 ntBASIC12.58□□□□□ -0.4
Q3U1D9 Shd-206ENSMUST00000225145 998 ntBASIC12.58□□□□□ -0.4
Q3U1D9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms