Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Atf4Q06507 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.91□□□□□ -0.18
Atf4Q06507 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC13.91□□□□□ -0.18
Atf4Q06507 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.91□□□□□ -0.18
Atf4Q06507 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Atf4Q06507 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atf4Q06507 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.91□□□□□ -0.18
Atf4Q06507 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Atf4Q06507 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atf4Q06507 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Atf4Q06507 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Atf4Q06507 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atf4Q06507 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Atf4Q06507 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atf4Q06507 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atf4Q06507 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atf4Q06507 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Atf4Q06507 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Atf4Q06507 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atf4Q06507 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Atf4Q06507 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atf4Q06507 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atf4Q06507 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Atf4Q06507 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Atf4Q06507 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atf4Q06507 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Atf4Q06507 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Atf4Q06507 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Atf4Q06507 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.9□□□□□ -0.18
Atf4Q06507 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atf4Q06507 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atf4Q06507 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atf4Q06507 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atf4Q06507 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Atf4Q06507 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atf4Q06507 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atf4Q06507 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atf4Q06507 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Atf4Q06507 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atf4Q06507 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atf4Q06507 Gm13223-201ENSMUST00000118609 747 ntBASIC13.9□□□□□ -0.18
Atf4Q06507 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.9□□□□□ -0.18
Atf4Q06507 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Atf4Q06507 Gm43767-201ENSMUST00000198933 381 ntBASIC13.9□□□□□ -0.18
Atf4Q06507 Gm6312-201ENSMUST00000204060 1194 ntBASIC13.9□□□□□ -0.18
Atf4Q06507 AC125539.1-202ENSMUST00000226449 670 ntBASIC13.9□□□□□ -0.18
Atf4Q06507 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atf4Q06507 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Atf4Q06507 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atf4Q06507 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
Atf4Q06507 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atf4Q06507 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atf4Q06507 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atf4Q06507 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Atf4Q06507 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atf4Q06507 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atf4Q06507 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atf4Q06507 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.9□□□□□ -0.19
Atf4Q06507 Gm8872-201ENSMUST00000197475 1341 ntBASIC13.9□□□□□ -0.19
Atf4Q06507 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.89□□□□□ -0.19
Atf4Q06507 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atf4Q06507 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atf4Q06507 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Atf4Q06507 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atf4Q06507 Rubie-203ENSMUST00000227803 2430 ntBASIC13.89□□□□□ -0.19
Atf4Q06507 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atf4Q06507 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Atf4Q06507 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Atf4Q06507 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.89□□□□□ -0.19
Atf4Q06507 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.89□□□□□ -0.19
Atf4Q06507 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Atf4Q06507 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Atf4Q06507 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Atf4Q06507 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Atf4Q06507 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC13.89□□□□□ -0.19
Atf4Q06507 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Atf4Q06507 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Atf4Q06507 Gm5779-201ENSMUST00000218467 910 ntBASIC13.89□□□□□ -0.19
Atf4Q06507 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atf4Q06507 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atf4Q06507 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Atf4Q06507 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atf4Q06507 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Atf4Q06507 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atf4Q06507 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Atf4Q06507 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atf4Q06507 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atf4Q06507 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.89□□□□□ -0.19
Atf4Q06507 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atf4Q06507 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Atf4Q06507 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.89□□□□□ -0.19
Atf4Q06507 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atf4Q06507 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atf4Q06507 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atf4Q06507 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atf4Q06507 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atf4Q06507 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atf4Q06507 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atf4Q06507 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atf4Q06507 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms