Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps45P97390 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Vps45P97390 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Vps45P97390 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Vps45P97390 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps45P97390 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.01□□□□□ -0.01
Vps45P97390 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps45P97390 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.01□□□□□ -0.01
Vps45P97390 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps45P97390 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps45P97390 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps45P97390 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Vps45P97390 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Vps45P97390 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.01□□□□□ -0.01
Vps45P97390 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.01□□□□□ -0.01
Vps45P97390 Gm15483-201ENSMUST00000120338 456 ntBASIC15.01□□□□□ -0.01
Vps45P97390 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.01□□□□□ -0.01
Vps45P97390 Gm9726-201ENSMUST00000180321 678 ntBASIC15.01□□□□□ -0.01
Vps45P97390 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.01□□□□□ -0.01
Vps45P97390 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps45P97390 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps45P97390 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps45P97390 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Vps45P97390 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps45P97390 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps45P97390 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps45P97390 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps45P97390 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps45P97390 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.01□□□□□ -0.01
Vps45P97390 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps45P97390 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps45P97390 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps45P97390 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps45P97390 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps45P97390 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps45P97390 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps45P97390 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Vps45P97390 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps45P97390 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Vps45P97390 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps45P97390 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps45P97390 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Vps45P97390 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps45P97390 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps45P97390 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps45P97390 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps45P97390 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Vps45P97390 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Vps45P97390 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps45P97390 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps45P97390 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15□□□□□ -0.01
Vps45P97390 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15□□□□□ -0.01
Vps45P97390 CT030684.1-201ENSMUST00000227292 914 ntBASIC15□□□□□ -0.01
Vps45P97390 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps45P97390 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Vps45P97390 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps45P97390 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15□□□□□ -0.01
Vps45P97390 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps45P97390 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps45P97390 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps45P97390 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15□□□□□ -0.01
Vps45P97390 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps45P97390 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Vps45P97390 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Vps45P97390 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps45P97390 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps45P97390 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps45P97390 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps45P97390 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps45P97390 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps45P97390 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps45P97390 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps45P97390 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps45P97390 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps45P97390 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps45P97390 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps45P97390 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Vps45P97390 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Vps45P97390 Gm13823-201ENSMUST00000119930 345 ntBASIC14.99□□□□□ -0.01
Vps45P97390 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps45P97390 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps45P97390 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps45P97390 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.99□□□□□ -0.01
Vps45P97390 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.99□□□□□ -0.01
Vps45P97390 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps45P97390 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps45P97390 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps45P97390 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps45P97390 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.99□□□□□ -0.01
Vps45P97390 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps45P97390 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Vps45P97390 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.99□□□□□ -0.01
Vps45P97390 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps45P97390 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps45P97390 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps45P97390 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Vps45P97390 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Vps45P97390 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps45P97390 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps45P97390 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms