Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-3P97334 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-3P97334 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-3P97334 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-3P97334 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-3P97334 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-3P97334 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nkx2-3P97334 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC18.13■□□□□ 0.49
Nkx2-3P97334 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-3P97334 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-3P97334 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-3P97334 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC18.13■□□□□ 0.49
Nkx2-3P97334 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nkx2-3P97334 Gm6283-201ENSMUST00000182369 1000 ntBASIC18.13■□□□□ 0.49
Nkx2-3P97334 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Nkx2-3P97334 Gm17795-201ENSMUST00000214505 757 ntBASIC18.13■□□□□ 0.49
Nkx2-3P97334 AC156560.2-201ENSMUST00000221232 264 ntBASIC18.13■□□□□ 0.49
Nkx2-3P97334 AC102291.3-201ENSMUST00000226566 405 ntBASIC18.13■□□□□ 0.49
Nkx2-3P97334 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Nkx2-3P97334 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-3P97334 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-3P97334 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-3P97334 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-3P97334 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nkx2-3P97334 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-3P97334 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Nkx2-3P97334 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-3P97334 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-3P97334 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-3P97334 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Nkx2-3P97334 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC18.12■□□□□ 0.49
Nkx2-3P97334 Gm15806-201ENSMUST00000120696 955 ntBASIC18.12■□□□□ 0.49
Nkx2-3P97334 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-3P97334 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nkx2-3P97334 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Nkx2-3P97334 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-3P97334 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-3P97334 AC153937.1-201ENSMUST00000218734 412 ntBASIC18.12■□□□□ 0.49
Nkx2-3P97334 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC18.12■□□□□ 0.49
Nkx2-3P97334 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-3P97334 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Nkx2-3P97334 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-3P97334 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-3P97334 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-3P97334 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nkx2-3P97334 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-3P97334 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-3P97334 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-3P97334 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-3P97334 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-3P97334 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Nkx2-3P97334 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-3P97334 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-3P97334 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-3P97334 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-3P97334 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-3P97334 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-3P97334 Gm37748-201ENSMUST00000194379 1140 ntBASIC18.11■□□□□ 0.49
Nkx2-3P97334 Gm7446-201ENSMUST00000221035 1240 ntBASIC18.11■□□□□ 0.49
Nkx2-3P97334 AC155252.1-201ENSMUST00000226462 1208 ntBASIC18.11■□□□□ 0.49
Nkx2-3P97334 AC150560.1-201ENSMUST00000227731 1187 ntBASIC18.11■□□□□ 0.49
Nkx2-3P97334 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-3P97334 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-3P97334 Gm14451-201ENSMUST00000121581 1542 ntBASIC18.11■□□□□ 0.49
Nkx2-3P97334 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-3P97334 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-3P97334 Gm42471-201ENSMUST00000201457 1865 ntBASIC18.11■□□□□ 0.49
Nkx2-3P97334 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-3P97334 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Nkx2-3P97334 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-3P97334 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-3P97334 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-3P97334 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Nkx2-3P97334 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.1■□□□□ 0.49
Nkx2-3P97334 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-3P97334 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-3P97334 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-3P97334 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-3P97334 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-3P97334 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-3P97334 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Nkx2-3P97334 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC18.1■□□□□ 0.49
Nkx2-3P97334 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Nkx2-3P97334 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-3P97334 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-3P97334 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC18.1■□□□□ 0.49
Nkx2-3P97334 AC154532.1-201ENSMUST00000227860 965 ntBASIC18.1■□□□□ 0.49
Nkx2-3P97334 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Nkx2-3P97334 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.1■□□□□ 0.49
Nkx2-3P97334 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-3P97334 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-3P97334 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-3P97334 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-3P97334 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-3P97334 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-3P97334 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-3P97334 Gm10605-202ENSMUST00000183019 3198 ntBASIC18.1■□□□□ 0.49
Nkx2-3P97334 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Nkx2-3P97334 Gm38037-201ENSMUST00000192600 1624 ntBASIC18.09■□□□□ 0.49
Nkx2-3P97334 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms