Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Lhx1P63006 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx1P63006 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx1P63006 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.25□□□□□ -0.13
Lhx1P63006 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx1P63006 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx1P63006 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx1P63006 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Lhx1P63006 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.25□□□□□ -0.13
Lhx1P63006 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx1P63006 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx1P63006 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx1P63006 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Lhx1P63006 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx1P63006 Gm27631-201ENSMUST00000184163 466 ntBASIC14.25□□□□□ -0.13
Lhx1P63006 AA619741-201ENSMUST00000195095 646 ntBASIC14.25□□□□□ -0.13
Lhx1P63006 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.25□□□□□ -0.13
Lhx1P63006 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.25□□□□□ -0.13
Lhx1P63006 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.25□□□□□ -0.13
Lhx1P63006 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx1P63006 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx1P63006 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx1P63006 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx1P63006 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx1P63006 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx1P63006 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx1P63006 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx1P63006 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx1P63006 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx1P63006 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx1P63006 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx1P63006 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx1P63006 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Lhx1P63006 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx1P63006 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx1P63006 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx1P63006 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx1P63006 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx1P63006 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx1P63006 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx1P63006 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx1P63006 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx1P63006 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx1P63006 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx1P63006 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx1P63006 Gm13223-201ENSMUST00000118609 747 ntBASIC14.24□□□□□ -0.13
Lhx1P63006 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.24□□□□□ -0.13
Lhx1P63006 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Lhx1P63006 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx1P63006 Gm27306-201ENSMUST00000183970 107 ntBASIC14.24□□□□□ -0.13
Lhx1P63006 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.24□□□□□ -0.13
Lhx1P63006 Gm20949-201ENSMUST00000206478 952 ntBASIC14.24□□□□□ -0.13
Lhx1P63006 Gm45453-201ENSMUST00000211758 853 ntBASIC14.24□□□□□ -0.13
Lhx1P63006 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx1P63006 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx1P63006 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.24□□□□□ -0.13
Lhx1P63006 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx1P63006 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Lhx1P63006 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lhx1P63006 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.24□□□□□ -0.13
Lhx1P63006 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lhx1P63006 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx1P63006 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx1P63006 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Lhx1P63006 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx1P63006 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx1P63006 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx1P63006 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Lhx1P63006 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Lhx1P63006 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx1P63006 Gm15653-201ENSMUST00000119247 907 ntBASIC14.23□□□□□ -0.13
Lhx1P63006 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx1P63006 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.23□□□□□ -0.13
Lhx1P63006 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx1P63006 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.23□□□□□ -0.13
Lhx1P63006 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx1P63006 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx1P63006 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx1P63006 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx1P63006 Efs-202ENSMUST00000227037 2540 ntBASIC14.23□□□□□ -0.13
Lhx1P63006 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx1P63006 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx1P63006 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx1P63006 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Lhx1P63006 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx1P63006 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.23□□□□□ -0.13
Lhx1P63006 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Lhx1P63006 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx1P63006 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx1P63006 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx1P63006 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx1P63006 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms