Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab4aP56371 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab4aP56371 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab4aP56371 Gm11336-201ENSMUST00000118168 334 ntBASIC11.48□□□□□ -0.57
Rab4aP56371 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab4aP56371 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC11.48□□□□□ -0.57
Rab4aP56371 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab4aP56371 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC11.48□□□□□ -0.57
Rab4aP56371 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rab4aP56371 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rab4aP56371 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab4aP56371 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab4aP56371 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.48□□□□□ -0.57
Rab4aP56371 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab4aP56371 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rab4aP56371 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab4aP56371 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.48□□□□□ -0.57
Rab4aP56371 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.48□□□□□ -0.57
Rab4aP56371 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab4aP56371 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.48□□□□□ -0.57
Rab4aP56371 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab4aP56371 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rab4aP56371 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab4aP56371 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab4aP56371 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rab4aP56371 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Rab4aP56371 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab4aP56371 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab4aP56371 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rab4aP56371 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.48□□□□□ -0.57
Rab4aP56371 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab4aP56371 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab4aP56371 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rab4aP56371 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Rab4aP56371 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.47□□□□□ -0.57
Rab4aP56371 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Rab4aP56371 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Rab4aP56371 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC11.47□□□□□ -0.57
Rab4aP56371 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.47□□□□□ -0.57
Rab4aP56371 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.47□□□□□ -0.57
Rab4aP56371 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Rab4aP56371 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Rab4aP56371 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rab4aP56371 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rab4aP56371 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Rab4aP56371 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rab4aP56371 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rab4aP56371 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rab4aP56371 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.46□□□□□ -0.57
Rab4aP56371 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rab4aP56371 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rab4aP56371 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.46□□□□□ -0.57
Rab4aP56371 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rab4aP56371 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rab4aP56371 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rab4aP56371 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rab4aP56371 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Rab4aP56371 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rab4aP56371 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rab4aP56371 Gm12008-201ENSMUST00000117791 755 ntBASIC11.46□□□□□ -0.57
Rab4aP56371 Gm12441-201ENSMUST00000121806 588 ntBASIC11.46□□□□□ -0.57
Rab4aP56371 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rab4aP56371 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC11.46□□□□□ -0.57
Rab4aP56371 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC11.46□□□□□ -0.57
Rab4aP56371 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.46□□□□□ -0.57
Rab4aP56371 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rab4aP56371 AC156016.1-201ENSMUST00000227190 1035 ntBASIC11.46□□□□□ -0.57
Rab4aP56371 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rab4aP56371 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rab4aP56371 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rab4aP56371 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Rab4aP56371 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Rab4aP56371 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rab4aP56371 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Rab4aP56371 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rab4aP56371 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Rab4aP56371 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms