Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Gm8655-201ENSMUST00000221159 852 ntBASIC12.05□□□□□ -0.48
Nkx2-1P50220 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-1P50220 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Nkx2-1P50220 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-1P50220 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Gm18669-201ENSMUST00000216049 778 ntBASIC12.04□□□□□ -0.48
Nkx2-1P50220 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Acot6-202ENSMUST00000222921 3622 ntBASIC12.04□□□□□ -0.48
Nkx2-1P50220 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.04□□□□□ -0.48
Nkx2-1P50220 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nkx2-1P50220 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.03□□□□□ -0.48
Nkx2-1P50220 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nkx2-1P50220 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nkx2-1P50220 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Gm12895-201ENSMUST00000122214 226 ntBASIC12.03□□□□□ -0.48
Nkx2-1P50220 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.03□□□□□ -0.48
Nkx2-1P50220 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-1P50220 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nkx2-1P50220 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx2-1P50220 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx2-1P50220 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms