Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.9□□□□□ -0.18
Cdh4P39038 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.9□□□□□ -0.18
Cdh4P39038 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.9□□□□□ -0.18
Cdh4P39038 Gm5312-201ENSMUST00000203728 547 ntBASIC13.9□□□□□ -0.18
Cdh4P39038 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh4P39038 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.9□□□□□ -0.18
Cdh4P39038 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh4P39038 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh4P39038 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh4P39038 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh4P39038 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh4P39038 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh4P39038 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh4P39038 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cdh4P39038 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cdh4P39038 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cdh4P39038 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cdh4P39038 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh4P39038 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh4P39038 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh4P39038 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh4P39038 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh4P39038 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cdh4P39038 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh4P39038 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.89□□□□□ -0.19
Cdh4P39038 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.89□□□□□ -0.19
Cdh4P39038 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.89□□□□□ -0.19
Cdh4P39038 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh4P39038 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.89□□□□□ -0.19
Cdh4P39038 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.89□□□□□ -0.19
Cdh4P39038 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh4P39038 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh4P39038 Olfr286-202ENSMUST00000205305 969 ntBASIC13.89□□□□□ -0.19
Cdh4P39038 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cdh4P39038 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.89□□□□□ -0.19
Cdh4P39038 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh4P39038 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cdh4P39038 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh4P39038 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.89□□□□□ -0.19
Cdh4P39038 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh4P39038 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh4P39038 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Cdh4P39038 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh4P39038 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh4P39038 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh4P39038 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh4P39038 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh4P39038 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Cdh4P39038 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cdh4P39038 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cdh4P39038 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Cdh4P39038 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cdh4P39038 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.88□□□□□ -0.19
Cdh4P39038 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.88□□□□□ -0.19
Cdh4P39038 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.88□□□□□ -0.19
Cdh4P39038 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.88□□□□□ -0.19
Cdh4P39038 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.88□□□□□ -0.19
Cdh4P39038 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cdh4P39038 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cdh4P39038 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Cdh4P39038 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Cdh4P39038 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cdh4P39038 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh4P39038 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.88□□□□□ -0.19
Cdh4P39038 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh4P39038 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh4P39038 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh4P39038 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh4P39038 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh4P39038 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms