Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxa1P35582 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxa1P35582 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.43□□□□□ -0.26
Foxa1P35582 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxa1P35582 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Foxa1P35582 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxa1P35582 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxa1P35582 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Foxa1P35582 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxa1P35582 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Foxa1P35582 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxa1P35582 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.43□□□□□ -0.26
Foxa1P35582 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Foxa1P35582 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxa1P35582 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxa1P35582 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxa1P35582 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Foxa1P35582 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.42□□□□□ -0.26
Foxa1P35582 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxa1P35582 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxa1P35582 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxa1P35582 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxa1P35582 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxa1P35582 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Foxa1P35582 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.42□□□□□ -0.26
Foxa1P35582 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Foxa1P35582 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Foxa1P35582 Gm12134-201ENSMUST00000122109 520 ntBASIC13.42□□□□□ -0.26
Foxa1P35582 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxa1P35582 Gm23547-201ENSMUST00000158210 271 ntBASIC13.42□□□□□ -0.26
Foxa1P35582 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.42□□□□□ -0.26
Foxa1P35582 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.42□□□□□ -0.26
Foxa1P35582 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Foxa1P35582 Gm43474-201ENSMUST00000196415 774 ntBASIC13.42□□□□□ -0.26
Foxa1P35582 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.42□□□□□ -0.26
Foxa1P35582 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Foxa1P35582 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxa1P35582 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.42□□□□□ -0.26
Foxa1P35582 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxa1P35582 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.42□□□□□ -0.26
Foxa1P35582 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Foxa1P35582 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Foxa1P35582 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxa1P35582 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Foxa1P35582 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.42□□□□□ -0.26
Foxa1P35582 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Foxa1P35582 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Foxa1P35582 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Foxa1P35582 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Foxa1P35582 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.41□□□□□ -0.26
Foxa1P35582 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.41□□□□□ -0.26
Foxa1P35582 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Gm26308-201ENSMUST00000157768 69 ntBASIC13.41□□□□□ -0.26
Foxa1P35582 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.41□□□□□ -0.26
Foxa1P35582 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.41□□□□□ -0.26
Foxa1P35582 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.41□□□□□ -0.26
Foxa1P35582 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.41□□□□□ -0.26
Foxa1P35582 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.41□□□□□ -0.26
Foxa1P35582 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Foxa1P35582 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Foxa1P35582 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Foxa1P35582 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Foxa1P35582 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxa1P35582 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Foxa1P35582 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Foxa1P35582 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Foxa1P35582 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxa1P35582 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.4□□□□□ -0.26
Foxa1P35582 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxa1P35582 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Foxa1P35582 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxa1P35582 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxa1P35582 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxa1P35582 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Foxa1P35582 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxa1P35582 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms