Protein–RNA interactions for Protein: P27048

Snrpb, Small nuclear ribonucleoprotein-associated protein B, mousemouse

Known RBP Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpbP27048 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SnrpbP27048 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SnrpbP27048 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.82□□□□□ -0.36
SnrpbP27048 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC12.82□□□□□ -0.36
SnrpbP27048 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SnrpbP27048 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SnrpbP27048 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SnrpbP27048 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.82□□□□□ -0.36
SnrpbP27048 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SnrpbP27048 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SnrpbP27048 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SnrpbP27048 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SnrpbP27048 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SnrpbP27048 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SnrpbP27048 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.82□□□□□ -0.36
SnrpbP27048 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
SnrpbP27048 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SnrpbP27048 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SnrpbP27048 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SnrpbP27048 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SnrpbP27048 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SnrpbP27048 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SnrpbP27048 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SnrpbP27048 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SnrpbP27048 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SnrpbP27048 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
SnrpbP27048 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SnrpbP27048 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SnrpbP27048 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SnrpbP27048 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.81□□□□□ -0.36
SnrpbP27048 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.81□□□□□ -0.36
SnrpbP27048 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SnrpbP27048 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC12.81□□□□□ -0.36
SnrpbP27048 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.81□□□□□ -0.36
SnrpbP27048 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
SnrpbP27048 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SnrpbP27048 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.81□□□□□ -0.36
SnrpbP27048 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.81□□□□□ -0.36
SnrpbP27048 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.81□□□□□ -0.36
SnrpbP27048 Gm8655-201ENSMUST00000221159 852 ntBASIC12.81□□□□□ -0.36
SnrpbP27048 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
SnrpbP27048 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.81□□□□□ -0.36
SnrpbP27048 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SnrpbP27048 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SnrpbP27048 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SnrpbP27048 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SnrpbP27048 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SnrpbP27048 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SnrpbP27048 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SnrpbP27048 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.8□□□□□ -0.36
SnrpbP27048 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SnrpbP27048 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SnrpbP27048 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SnrpbP27048 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SnrpbP27048 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SnrpbP27048 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
SnrpbP27048 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
SnrpbP27048 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SnrpbP27048 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.8□□□□□ -0.36
SnrpbP27048 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SnrpbP27048 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SnrpbP27048 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SnrpbP27048 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
SnrpbP27048 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
SnrpbP27048 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
SnrpbP27048 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms