Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fv4P11370 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fv4P11370 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fv4P11370 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Fv4P11370 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Fv4P11370 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Fv4P11370 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fv4P11370 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Fv4P11370 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.03□□□□□ -0.16
Fv4P11370 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.03□□□□□ -0.16
Fv4P11370 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Gm14140-201ENSMUST00000119999 995 ntBASIC14.03□□□□□ -0.16
Fv4P11370 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.03□□□□□ -0.16
Fv4P11370 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.03□□□□□ -0.16
Fv4P11370 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Fv4P11370 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fv4P11370 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fv4P11370 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Fv4P11370 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Fv4P11370 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fv4P11370 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fv4P11370 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.02□□□□□ -0.16
Fv4P11370 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.02□□□□□ -0.16
Fv4P11370 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fv4P11370 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.02□□□□□ -0.16
Fv4P11370 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Fv4P11370 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.02□□□□□ -0.17
Fv4P11370 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.02□□□□□ -0.17
Fv4P11370 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.02□□□□□ -0.17
Fv4P11370 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Fv4P11370 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Fv4P11370 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.02□□□□□ -0.17
Fv4P11370 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Fv4P11370 Gm37230-201ENSMUST00000194491 818 ntBASIC14.02□□□□□ -0.17
Fv4P11370 Gm45098-201ENSMUST00000207179 657 ntBASIC14.02□□□□□ -0.17
Fv4P11370 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Fv4P11370 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Fv4P11370 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fv4P11370 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fv4P11370 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fv4P11370 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fv4P11370 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Fv4P11370 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fv4P11370 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fv4P11370 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fv4P11370 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Fv4P11370 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.01□□□□□ -0.17
Fv4P11370 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.01□□□□□ -0.17
Fv4P11370 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.01□□□□□ -0.17
Fv4P11370 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Fv4P11370 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Fv4P11370 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.01□□□□□ -0.17
Fv4P11370 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 108.4 ms