Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04224 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P04224 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04224 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04224 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
P04224 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04224 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.77□□□□□ -0.37
P04224 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04224 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
P04224 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
P04224 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
P04224 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
P04224 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.76□□□□□ -0.37
P04224 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
P04224 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.76□□□□□ -0.37
P04224 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
P04224 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P04224 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04224 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04224 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04224 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04224 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04224 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04224 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04224 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.75□□□□□ -0.37
P04224 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04224 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.75□□□□□ -0.37
P04224 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04224 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04224 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04224 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
P04224 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
P04224 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.75□□□□□ -0.37
P04224 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
P04224 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04224 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04224 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04224 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.75□□□□□ -0.37
P04224 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04224 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
P04224 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
P04224 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04224 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
P04224 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04224 Carlr-201ENSMUST00000181515 2574 ntBASIC12.75□□□□□ -0.37
P04224 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.74□□□□□ -0.37
P04224 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
P04224 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
P04224 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04224 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04224 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04224 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
P04224 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
P04224 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
P04224 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
P04224 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
P04224 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
P04224 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
P04224 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.74□□□□□ -0.37
P04224 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
P04224 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04224 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
P04224 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
P04224 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
P04224 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.74□□□□□ -0.37
P04224 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04224 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04224 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.74□□□□□ -0.37
P04224 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
P04224 Gm23547-201ENSMUST00000158210 271 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms