Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.84□□□□□ -0.03
P01878 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
P01878 Gm15240-201ENSMUST00000118156 720 ntBASIC14.84□□□□□ -0.03
P01878 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
P01878 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
P01878 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
P01878 Mir7654-201ENSMUST00000185082 70 ntBASIC14.84□□□□□ -0.03
P01878 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.84□□□□□ -0.03
P01878 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.84□□□□□ -0.03
P01878 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01878 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.84□□□□□ -0.03
P01878 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01878 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01878 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01878 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01878 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01878 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01878 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01878 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01878 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
P01878 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01878 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01878 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
P01878 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01878 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01878 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01878 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01878 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
P01878 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01878 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P01878 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
P01878 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
P01878 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
P01878 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
P01878 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
P01878 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
P01878 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P01878 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
P01878 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
P01878 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
P01878 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
P01878 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
P01878 Gm4804-201ENSMUST00000182234 999 ntBASIC14.83□□□□□ -0.04
P01878 Gm27701-201ENSMUST00000184498 110 ntBASIC14.83□□□□□ -0.04
P01878 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.83□□□□□ -0.04
P01878 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.83□□□□□ -0.04
P01878 Gm44608-201ENSMUST00000206827 855 ntBASIC14.83□□□□□ -0.04
P01878 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.83□□□□□ -0.04
P01878 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.83□□□□□ -0.04
P01878 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
P01878 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.83□□□□□ -0.04
P01878 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
P01878 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P01878 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P01878 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P01878 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P01878 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
P01878 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
P01878 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
P01878 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P01878 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.82□□□□□ -0.04
P01878 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01878 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01878 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01878 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
P01878 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01878 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01878 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01878 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.82□□□□□ -0.04
P01878 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
P01878 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01878 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.82□□□□□ -0.04
P01878 Gm5035-201ENSMUST00000215581 927 ntBASIC14.82□□□□□ -0.04
P01878 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
P01878 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.82□□□□□ -0.04
P01878 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01878 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01878 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01878 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01878 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01878 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.82□□□□□ -0.04
P01878 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01878 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01878 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01878 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.81□□□□□ -0.04
P01878 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01878 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
P01878 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01878 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01878 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01878 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
P01878 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01878 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01878 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01878 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01878 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01878 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01878 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01878 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01878 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms