Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01852 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01852 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
P01852 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01852 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01852 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
P01852 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01852 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01852 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.29□□□□□ -0.28
P01852 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.29□□□□□ -0.28
P01852 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P01852 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01852 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
P01852 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01852 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01852 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
P01852 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.29□□□□□ -0.28
P01852 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01852 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
P01852 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01852 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P01852 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01852 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.28□□□□□ -0.28
P01852 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
P01852 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
P01852 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01852 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01852 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01852 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P01852 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01852 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01852 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.28□□□□□ -0.28
P01852 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.28□□□□□ -0.28
P01852 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.28□□□□□ -0.28
P01852 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.28□□□□□ -0.28
P01852 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.28□□□□□ -0.28
P01852 Gm27920-201ENSMUST00000183953 96 ntBASIC13.28□□□□□ -0.28
P01852 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.28□□□□□ -0.28
P01852 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.28□□□□□ -0.28
P01852 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.28□□□□□ -0.28
P01852 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
P01852 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01852 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01852 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01852 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
P01852 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
P01852 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01852 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P01852 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
P01852 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01852 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P01852 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01852 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P01852 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
P01852 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
P01852 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
P01852 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
P01852 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
P01852 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
P01852 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
P01852 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
P01852 Gm25287-201ENSMUST00000103846 110 ntBASIC13.27□□□□□ -0.29
P01852 Gm22918-201ENSMUST00000103855 110 ntBASIC13.27□□□□□ -0.29
P01852 Gm14701-201ENSMUST00000117156 348 ntBASIC13.27□□□□□ -0.29
P01852 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.27□□□□□ -0.29
P01852 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.27□□□□□ -0.29
P01852 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.27□□□□□ -0.29
P01852 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
P01852 Gm43474-201ENSMUST00000196415 774 ntBASIC13.27□□□□□ -0.29
P01852 Gm5312-201ENSMUST00000203728 547 ntBASIC13.27□□□□□ -0.29
P01852 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01852 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01852 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01852 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.27□□□□□ -0.29
P01852 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.27□□□□□ -0.29
P01852 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01852 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01852 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
P01852 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01852 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01852 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
P01852 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01852 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01852 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01852 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01852 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01852 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P01852 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01852 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
P01852 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P01852 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
P01852 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01852 Gm8749-201ENSMUST00000117737 331 ntBASIC13.26□□□□□ -0.29
P01852 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.26□□□□□ -0.29
P01852 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P01852 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.26□□□□□ -0.29
P01852 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01852 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P01852 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.26□□□□□ -0.29
P01852 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms