Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Gm3139J3QK78 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Gm3139J3QK78 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm3139J3QK78 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm3139J3QK78 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.47□□□□□ -0.09
Gm3139J3QK78 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm3139J3QK78 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm3139J3QK78 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm3139J3QK78 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm3139J3QK78 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm3139J3QK78 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Gm3139J3QK78 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.47□□□□□ -0.09
Gm3139J3QK78 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.46□□□□□ -0.09
Gm3139J3QK78 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gm3139J3QK78 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm3139J3QK78 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm3139J3QK78 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm3139J3QK78 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Gm3139J3QK78 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Gm3139J3QK78 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm3139J3QK78 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.46□□□□□ -0.09
Gm3139J3QK78 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm3139J3QK78 Gm13453-201ENSMUST00000118708 357 ntBASIC14.46□□□□□ -0.09
Gm3139J3QK78 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gm3139J3QK78 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gm3139J3QK78 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm3139J3QK78 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Gm3139J3QK78 Mir7023-201ENSMUST00000185093 64 ntBASIC14.46□□□□□ -0.09
Gm3139J3QK78 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gm3139J3QK78 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gm3139J3QK78 Gm6888-201ENSMUST00000221983 706 ntBASIC14.46□□□□□ -0.09
Gm3139J3QK78 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Gm3139J3QK78 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm3139J3QK78 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm3139J3QK78 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gm3139J3QK78 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm3139J3QK78 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gm3139J3QK78 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm3139J3QK78 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Gm3139J3QK78 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gm3139J3QK78 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gm3139J3QK78 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gm3139J3QK78 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Gm27533-201ENSMUST00000183800 152 ntBASIC14.45□□□□□ -0.1
Gm3139J3QK78 Gm27631-201ENSMUST00000184163 466 ntBASIC14.45□□□□□ -0.1
Gm3139J3QK78 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3139J3QK78 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.45□□□□□ -0.1
Gm3139J3QK78 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3139J3QK78 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Gm3139J3QK78 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Gm13223-201ENSMUST00000118609 747 ntBASIC14.44□□□□□ -0.1
Gm3139J3QK78 Gm38294-201ENSMUST00000192831 381 ntBASIC14.44□□□□□ -0.1
Gm3139J3QK78 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.44□□□□□ -0.1
Gm3139J3QK78 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.44□□□□□ -0.1
Gm3139J3QK78 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3139J3QK78 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms