Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NpcdF8VQB8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NpcdF8VQB8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NpcdF8VQB8 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NpcdF8VQB8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NpcdF8VQB8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NpcdF8VQB8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NpcdF8VQB8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NpcdF8VQB8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NpcdF8VQB8 Mup-ps23-201ENSMUST00000118063 630 ntBASIC17.4■□□□□ 0.38
NpcdF8VQB8 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NpcdF8VQB8 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NpcdF8VQB8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NpcdF8VQB8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NpcdF8VQB8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NpcdF8VQB8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NpcdF8VQB8 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.4■□□□□ 0.38
NpcdF8VQB8 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NpcdF8VQB8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NpcdF8VQB8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NpcdF8VQB8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NpcdF8VQB8 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Gm27839-201ENSMUST00000184242 106 ntBASIC17.39■□□□□ 0.37
NpcdF8VQB8 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC17.39■□□□□ 0.37
NpcdF8VQB8 AC139580.1-202ENSMUST00000223574 928 ntBASIC17.39■□□□□ 0.37
NpcdF8VQB8 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NpcdF8VQB8 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NpcdF8VQB8 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.38■□□□□ 0.37
NpcdF8VQB8 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NpcdF8VQB8 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NpcdF8VQB8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NpcdF8VQB8 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NpcdF8VQB8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NpcdF8VQB8 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
NpcdF8VQB8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NpcdF8VQB8 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC17.38■□□□□ 0.37
NpcdF8VQB8 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC17.38■□□□□ 0.37
NpcdF8VQB8 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NpcdF8VQB8 Gm43179-201ENSMUST00000198797 275 ntBASIC17.38■□□□□ 0.37
NpcdF8VQB8 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NpcdF8VQB8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NpcdF8VQB8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NpcdF8VQB8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NpcdF8VQB8 Gm42853-201ENSMUST00000201273 1387 ntBASIC17.38■□□□□ 0.37
NpcdF8VQB8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NpcdF8VQB8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NpcdF8VQB8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NpcdF8VQB8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NpcdF8VQB8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NpcdF8VQB8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NpcdF8VQB8 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NpcdF8VQB8 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NpcdF8VQB8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NpcdF8VQB8 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NpcdF8VQB8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NpcdF8VQB8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NpcdF8VQB8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NpcdF8VQB8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.37■□□□□ 0.37
NpcdF8VQB8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NpcdF8VQB8 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NpcdF8VQB8 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.37■□□□□ 0.37
NpcdF8VQB8 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.37■□□□□ 0.37
NpcdF8VQB8 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms