Protein–RNA interactions for Protein: E9Q414

Apob, Apolipoprotein B-100, mousemouse

Predictions only

Length 4,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApobE9Q414 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
ApobE9Q414 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ApobE9Q414 Gm29705-201ENSMUST00000212598 474 ntBASIC8.68□□□□□ -1.02
ApobE9Q414 Gm17795-201ENSMUST00000214505 757 ntBASIC8.68□□□□□ -1.02
ApobE9Q414 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ApobE9Q414 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ApobE9Q414 Gm17383-201ENSMUST00000078739 1041 ntBASIC8.68□□□□□ -1.02
ApobE9Q414 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC8.68□□□□□ -1.02
ApobE9Q414 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ApobE9Q414 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ApobE9Q414 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ApobE9Q414 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ApobE9Q414 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ApobE9Q414 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
ApobE9Q414 Gm11793-201ENSMUST00000120433 981 ntBASIC8.67□□□□□ -1.02
ApobE9Q414 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
ApobE9Q414 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
ApobE9Q414 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
ApobE9Q414 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC8.67□□□□□ -1.02
ApobE9Q414 Gm7783-201ENSMUST00000204795 781 ntBASIC8.67□□□□□ -1.02
ApobE9Q414 Gm45880-201ENSMUST00000213041 853 ntBASIC8.67□□□□□ -1.02
ApobE9Q414 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ApobE9Q414 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ApobE9Q414 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ApobE9Q414 Gm13050-201ENSMUST00000122149 1345 ntBASIC8.67□□□□□ -1.02
ApobE9Q414 Gm13297-201ENSMUST00000120205 934 ntBASIC8.67□□□□□ -1.02
ApobE9Q414 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
ApobE9Q414 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC8.67□□□□□ -1.02
ApobE9Q414 Ighv1-25-201ENSMUST00000195638 345 ntBASIC8.67□□□□□ -1.02
ApobE9Q414 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ApobE9Q414 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
ApobE9Q414 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ApobE9Q414 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC8.67□□□□□ -1.02
ApobE9Q414 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
ApobE9Q414 Gm9816-201ENSMUST00000122292 1414 ntBASIC8.67□□□□□ -1.02
ApobE9Q414 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ApobE9Q414 Gm24644-201ENSMUST00000157114 139 ntBASIC8.67□□□□□ -1.02
ApobE9Q414 Ighv1-51-201ENSMUST00000192903 354 ntBASIC8.67□□□□□ -1.02
ApobE9Q414 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ApobE9Q414 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
ApobE9Q414 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ApobE9Q414 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
ApobE9Q414 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ApobE9Q414 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ApobE9Q414 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ApobE9Q414 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC8.66□□□□□ -1.02
ApobE9Q414 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC8.66□□□□□ -1.02
ApobE9Q414 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Gm43818-201ENSMUST00000200605 466 ntBASIC8.66□□□□□ -1.02
ApobE9Q414 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC8.66□□□□□ -1.02
ApobE9Q414 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
ApobE9Q414 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC8.66□□□□□ -1.02
ApobE9Q414 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Gm12485-201ENSMUST00000119641 291 ntBASIC8.66□□□□□ -1.02
ApobE9Q414 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
ApobE9Q414 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Gm6983-201ENSMUST00000214912 628 ntBASIC8.66□□□□□ -1.02
ApobE9Q414 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC8.66□□□□□ -1.02
ApobE9Q414 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC8.66□□□□□ -1.02
ApobE9Q414 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC8.66□□□□□ -1.02
ApobE9Q414 Gm11803-201ENSMUST00000119966 444 ntBASIC8.66□□□□□ -1.02
ApobE9Q414 Gm13385-201ENSMUST00000121089 220 ntBASIC8.66□□□□□ -1.02
ApobE9Q414 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC8.66□□□□□ -1.02
ApobE9Q414 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC8.66□□□□□ -1.02
ApobE9Q414 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
ApobE9Q414 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC8.66□□□□□ -1.02
ApobE9Q414 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
ApobE9Q414 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ApobE9Q414 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC8.65□□□□□ -1.02
ApobE9Q414 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
ApobE9Q414 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC8.65□□□□□ -1.02
ApobE9Q414 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
ApobE9Q414 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
ApobE9Q414 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
ApobE9Q414 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
ApobE9Q414 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms