Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a3E9PWQ3 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.22□□□□□ -0.13
Col6a3E9PWQ3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a3E9PWQ3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.22□□□□□ -0.13
Col6a3E9PWQ3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Col6a3E9PWQ3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a3E9PWQ3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a3E9PWQ3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a3E9PWQ3 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC14.22□□□□□ -0.13
Col6a3E9PWQ3 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Col6a3E9PWQ3 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a3E9PWQ3 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Col6a3E9PWQ3 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Col6a3E9PWQ3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.22□□□□□ -0.13
Col6a3E9PWQ3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a3E9PWQ3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a3E9PWQ3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a3E9PWQ3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a3E9PWQ3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a3E9PWQ3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a3E9PWQ3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a3E9PWQ3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a3E9PWQ3 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.21□□□□□ -0.13
Col6a3E9PWQ3 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a3E9PWQ3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a3E9PWQ3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a3E9PWQ3 Gm3318-201ENSMUST00000217604 1183 ntBASIC14.21□□□□□ -0.13
Col6a3E9PWQ3 Morn2-202ENSMUST00000227729 656 ntBASIC14.21□□□□□ -0.13
Col6a3E9PWQ3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a3E9PWQ3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a3E9PWQ3 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a3E9PWQ3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a3E9PWQ3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a3E9PWQ3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a3E9PWQ3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a3E9PWQ3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.21□□□□□ -0.13
Col6a3E9PWQ3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Col6a3E9PWQ3 Gm12203-201ENSMUST00000118235 598 ntBASIC14.21□□□□□ -0.14
Col6a3E9PWQ3 Gm11340-201ENSMUST00000119226 412 ntBASIC14.21□□□□□ -0.14
Col6a3E9PWQ3 Gm12209-201ENSMUST00000120089 596 ntBASIC14.21□□□□□ -0.14
Col6a3E9PWQ3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.21□□□□□ -0.14
Col6a3E9PWQ3 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.21□□□□□ -0.14
Col6a3E9PWQ3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col6a3E9PWQ3 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.21□□□□□ -0.14
Col6a3E9PWQ3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col6a3E9PWQ3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col6a3E9PWQ3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col6a3E9PWQ3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 Gm16379-201ENSMUST00000161469 348 ntBASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 Gm8762-201ENSMUST00000193486 339 ntBASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 AC174797.2-202ENSMUST00000225729 568 ntBASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 Gm5070-201ENSMUST00000177599 862 ntBASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a3E9PWQ3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Gm13369-201ENSMUST00000119442 987 ntBASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Gm6222-202ENSMUST00000182143 629 ntBASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms