Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Scn1aA2APX8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn1aA2APX8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn1aA2APX8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn1aA2APX8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Scn1aA2APX8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn1aA2APX8 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn1aA2APX8 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn1aA2APX8 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.14■□□□□ 0.01
Scn1aA2APX8 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn1aA2APX8 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn1aA2APX8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.14■□□□□ 0.01
Scn1aA2APX8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn1aA2APX8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn1aA2APX8 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Scn1aA2APX8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn1aA2APX8 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn1aA2APX8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn1aA2APX8 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn1aA2APX8 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn1aA2APX8 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.14■□□□□ 0.01
Scn1aA2APX8 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn1aA2APX8 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.14■□□□□ 0.01
Scn1aA2APX8 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Scn1aA2APX8 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn1aA2APX8 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.14■□□□□ 0.01
Scn1aA2APX8 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn1aA2APX8 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Scn1aA2APX8 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn1aA2APX8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn1aA2APX8 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Mir6977-201ENSMUST00000184960 64 ntBASIC15.13■□□□□ 0.01
Scn1aA2APX8 Gm7063-201ENSMUST00000186840 981 ntBASIC15.13■□□□□ 0.01
Scn1aA2APX8 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Scn1aA2APX8 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.13■□□□□ 0.01
Scn1aA2APX8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.13■□□□□ 0.01
Scn1aA2APX8 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.13■□□□□ 0.01
Scn1aA2APX8 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn1aA2APX8 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn1aA2APX8 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn1aA2APX8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn1aA2APX8 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn1aA2APX8 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.12■□□□□ 0.01
Scn1aA2APX8 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn1aA2APX8 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.12■□□□□ 0.01
Scn1aA2APX8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn1aA2APX8 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scn1aA2APX8 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scn1aA2APX8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn1aA2APX8 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn1aA2APX8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn1aA2APX8 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.12■□□□□ 0.01
Scn1aA2APX8 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Scn1aA2APX8 Gm12882-201ENSMUST00000121696 517 ntBASIC15.12■□□□□ 0.01
Scn1aA2APX8 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scn1aA2APX8 Gm21854-201ENSMUST00000179901 471 ntBASIC15.12■□□□□ 0.01
Scn1aA2APX8 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Scn1aA2APX8 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.12■□□□□ 0.01
Scn1aA2APX8 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn1aA2APX8 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn1aA2APX8 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn1aA2APX8 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Scn1aA2APX8 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.12■□□□□ 0.01
Scn1aA2APX8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.12■□□□□ 0.01
Scn1aA2APX8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Scn1aA2APX8 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn1aA2APX8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn1aA2APX8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms