Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap99A0A140LIX9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap99A0A140LIX9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap99A0A140LIX9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap99A0A140LIX9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfap99A0A140LIX9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Gm13823-201ENSMUST00000119930 345 ntBASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfap99A0A140LIX9 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cfap99A0A140LIX9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cfap99A0A140LIX9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.33■□□□□ 0.37
Cfap99A0A140LIX9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cfap99A0A140LIX9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cfap99A0A140LIX9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cfap99A0A140LIX9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cfap99A0A140LIX9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cfap99A0A140LIX9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.33■□□□□ 0.36
Cfap99A0A140LIX9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cfap99A0A140LIX9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap99A0A140LIX9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.33■□□□□ 0.36
Cfap99A0A140LIX9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap99A0A140LIX9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.33■□□□□ 0.36
Cfap99A0A140LIX9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap99A0A140LIX9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap99A0A140LIX9 Gm2423-201ENSMUST00000074863 733 ntBASIC17.33■□□□□ 0.36
Cfap99A0A140LIX9 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap99A0A140LIX9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cfap99A0A140LIX9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap99A0A140LIX9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cfap99A0A140LIX9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap99A0A140LIX9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cfap99A0A140LIX9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap99A0A140LIX9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap99A0A140LIX9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cfap99A0A140LIX9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap99A0A140LIX9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cfap99A0A140LIX9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap99A0A140LIX9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap99A0A140LIX9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap99A0A140LIX9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap99A0A140LIX9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap99A0A140LIX9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap99A0A140LIX9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap99A0A140LIX9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap99A0A140LIX9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap99A0A140LIX9 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap99A0A140LIX9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap99A0A140LIX9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms