Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc194A0A140LIT1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Ccdc194A0A140LIT1 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.46□□□□□ -0.09
Ccdc194A0A140LIT1 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc194A0A140LIT1 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc194A0A140LIT1 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc194A0A140LIT1 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc194A0A140LIT1 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc194A0A140LIT1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
Ccdc194A0A140LIT1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc194A0A140LIT1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Ccdc194A0A140LIT1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc194A0A140LIT1 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.46□□□□□ -0.09
Ccdc194A0A140LIT1 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.46□□□□□ -0.09
Ccdc194A0A140LIT1 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc194A0A140LIT1 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.46□□□□□ -0.09
Ccdc194A0A140LIT1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.46□□□□□ -0.09
Ccdc194A0A140LIT1 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc194A0A140LIT1 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc194A0A140LIT1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc194A0A140LIT1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.46□□□□□ -0.09
Ccdc194A0A140LIT1 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Ccdc194A0A140LIT1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc194A0A140LIT1 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc194A0A140LIT1 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc194A0A140LIT1 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc194A0A140LIT1 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.45□□□□□ -0.1
Ccdc194A0A140LIT1 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Gm10154-201ENSMUST00000084445 354 ntBASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms