Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm44291-201ENSMUST00000203102 2865 ntBASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm37500-201ENSMUST00000192059 1443 ntBASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm21451-201ENSMUST00000111062 2775 ntBASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm2308-201ENSMUST00000166539 1004 ntBASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm18489-201ENSMUST00000172565 551 ntBASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm5253-201ENSMUST00000187104 1025 ntBASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 AC164567.1-201ENSMUST00000219185 960 ntBASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 AC154757.1-201ENSMUST00000228289 336 ntBASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms