Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Gm13464-201ENSMUST00000119418 935 ntBASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Gm28033-201ENSMUST00000184224 96 ntBASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Gm6550-201ENSMUST00000187574 993 ntBASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7-1A0A0G2JEV5 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Gm8749-201ENSMUST00000117737 331 ntBASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Gm7230-201ENSMUST00000173026 815 ntBASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Gm4899-201ENSMUST00000178708 719 ntBASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Gm6376-201ENSMUST00000209407 580 ntBASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.17□□□□□ -0.62
Trav7-1A0A0G2JEV5 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7-1A0A0G2JEV5 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav7-1A0A0G2JEV5 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7-1A0A0G2JEV5 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7-1A0A0G2JEV5 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms