Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Gm27525-201ENSMUST00000184465 107 ntBASIC14.54□□□□□ -0.08
H2afb2S4R1M3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb2S4R1M3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Gm14042-201ENSMUST00000120139 833 ntBASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Gm20553-201ENSMUST00000204205 844 ntBASIC14.53□□□□□ -0.08
H2afb2S4R1M3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.53□□□□□ -0.08
H2afb2S4R1M3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H2afb2S4R1M3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
H2afb2S4R1M3 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H2afb2S4R1M3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.08
H2afb2S4R1M3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms