Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl28Q9JIL2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccl28Q9JIL2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Gm18195-201ENSMUST00000207604 706 ntBASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Gm15590-201ENSMUST00000078419 552 ntBASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ccl28Q9JIL2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl28Q9JIL2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl28Q9JIL2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms