Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Gm27301-201ENSMUST00000184012 127 ntBASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Chchd1-203ENSMUST00000224633 557 ntBASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.46□□□□□ -0.09
Tubb3Q9ERD7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tubb3Q9ERD7 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tubb3Q9ERD7 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Tubb3Q9ERD7 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Tubb3Q9ERD7 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tubb3Q9ERD7 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Tubb3Q9ERD7 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Tubb3Q9ERD7 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Tubb3Q9ERD7 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tubb3Q9ERD7 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tubb3Q9ERD7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tubb3Q9ERD7 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tubb3Q9ERD7 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tubb3Q9ERD7 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tubb3Q9ERD7 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tubb3Q9ERD7 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Tubb3Q9ERD7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tubb3Q9ERD7 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tubb3Q9ERD7 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.45□□□□□ -0.1
Tubb3Q9ERD7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tubb3Q9ERD7 Gm45747-201ENSMUST00000212203 999 ntBASIC14.45□□□□□ -0.1
Tubb3Q9ERD7 Thap2-203ENSMUST00000218989 527 ntBASIC14.45□□□□□ -0.1
Tubb3Q9ERD7 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tubb3Q9ERD7 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tubb3Q9ERD7 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tubb3Q9ERD7 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tubb3Q9ERD7 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tubb3Q9ERD7 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tubb3Q9ERD7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tubb3Q9ERD7 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.45□□□□□ -0.1
Tubb3Q9ERD7 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms