Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ssr1Q9CY50 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.82■□□□□ 0.12
Ssr1Q9CY50 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.82■□□□□ 0.12
Ssr1Q9CY50 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ssr1Q9CY50 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssr1Q9CY50 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssr1Q9CY50 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssr1Q9CY50 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssr1Q9CY50 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssr1Q9CY50 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssr1Q9CY50 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssr1Q9CY50 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ssr1Q9CY50 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssr1Q9CY50 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssr1Q9CY50 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.82■□□□□ 0.12
Ssr1Q9CY50 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ssr1Q9CY50 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssr1Q9CY50 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssr1Q9CY50 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssr1Q9CY50 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssr1Q9CY50 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssr1Q9CY50 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.81■□□□□ 0.12
Ssr1Q9CY50 Gm7153-201ENSMUST00000117092 455 ntBASIC15.81■□□□□ 0.12
Ssr1Q9CY50 Gm7862-201ENSMUST00000121461 292 ntBASIC15.81■□□□□ 0.12
Ssr1Q9CY50 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ssr1Q9CY50 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.81■□□□□ 0.12
Ssr1Q9CY50 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ssr1Q9CY50 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssr1Q9CY50 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssr1Q9CY50 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.81■□□□□ 0.12
Ssr1Q9CY50 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.81■□□□□ 0.12
Ssr1Q9CY50 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.81■□□□□ 0.12
Ssr1Q9CY50 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ssr1Q9CY50 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssr1Q9CY50 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Ssr1Q9CY50 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.81■□□□□ 0.12
Ssr1Q9CY50 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssr1Q9CY50 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssr1Q9CY50 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssr1Q9CY50 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ssr1Q9CY50 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssr1Q9CY50 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Gm12134-201ENSMUST00000122109 520 ntBASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Mir8098-201ENSMUST00000184011 137 ntBASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ssr1Q9CY50 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms