Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd1lQ9CXF7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd1lQ9CXF7 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Chd1lQ9CXF7 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Chd1lQ9CXF7 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Chd1lQ9CXF7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd1lQ9CXF7 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.44■□□□□ 0.22
Chd1lQ9CXF7 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd1lQ9CXF7 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Chd1lQ9CXF7 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd1lQ9CXF7 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chd1lQ9CXF7 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd1lQ9CXF7 Gm38094-201ENSMUST00000195864 2978 ntBASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1lQ9CXF7 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms