Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.77□□□□□ -0.37
Scrt1Q99M85 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Gm12859-201ENSMUST00000117834 427 ntBASIC12.76□□□□□ -0.37
Scrt1Q99M85 Gm18737-201ENSMUST00000173594 937 ntBASIC12.76□□□□□ -0.37
Scrt1Q99M85 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.76□□□□□ -0.37
Scrt1Q99M85 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.76□□□□□ -0.37
Scrt1Q99M85 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.76□□□□□ -0.37
Scrt1Q99M85 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scrt1Q99M85 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Gm14767-201ENSMUST00000121559 586 ntBASIC12.75□□□□□ -0.37
Scrt1Q99M85 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Gm23984-201ENSMUST00000157139 203 ntBASIC12.75□□□□□ -0.37
Scrt1Q99M85 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scrt1Q99M85 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Gm6745-201ENSMUST00000199216 526 ntBASIC12.75□□□□□ -0.37
Scrt1Q99M85 Gm44344-201ENSMUST00000200287 129 ntBASIC12.75□□□□□ -0.37
Scrt1Q99M85 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scrt1Q99M85 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms