Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp1b1Q99LU0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp1b1Q99LU0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Chmp1b1Q99LU0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp1b1Q99LU0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp1b1Q99LU0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp1b1Q99LU0 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp1b1Q99LU0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp1b1Q99LU0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Chmp1b1Q99LU0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.77□□□□□ -0.21
Chmp1b1Q99LU0 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.77□□□□□ -0.21
Chmp1b1Q99LU0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp1b1Q99LU0 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp1b1Q99LU0 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp1b1Q99LU0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp1b1Q99LU0 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Chmp1b1Q99LU0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp1b1Q99LU0 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Chmp1b1Q99LU0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp1b1Q99LU0 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Gm15467-201ENSMUST00000120582 445 ntBASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp1b1Q99LU0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms